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Pumpkin cupcakes with maple cream cheese frosting, cinnamon, and star anise to garnish sit on a white tray. The front cupcake has a bite taken out of it.
Home // Courses // Desserts // Pumpkin Cupcakes with Maple Cream Cheese Frosting

Pumpkin Cupcakes with Maple Cream Cheese Frosting

Fluffy gluten free pumpkin cupcakes infused with warming notes of pumpkin spice. Maple cream cheese frosting heightens the sweet Fall flavor of these cupcakes!
Prep Time 5 minutes minutes
Cook Time 25 minutes minutes
Total Time 30 minutes minutes
Jump to RecipePrint Recipe

For all my pumpkin spice fans out there, this recipe is for you. Moist and fluffy pumpkin spice cupcakes with a luscious maple cream cheese frosting … these should be the official cupcake of Fall!

I’m absolutely in love with the warm notes of pumpkin pie spice in these cupcakes. And the cream cheese frosting is sweetened with maple syrup plus has notes of cinnamon, the perfect cool yet cozy topping for these cupcakes.

A pumpkin cupcake with maple cream cheese frosting has a bite taken out of it. A star anise sits on top of the frosting with cinnamon sprinkled on top. More cupcakes sit in the background.

I’ll be sharing more of my favorite pumpkin desserts down below so be sure to check those out. In the meantime, may I suggest these tasty Gluten Free Pumpkin Pancakes for your next breakfast?! Fluffy pancakes infused with the warming spices of cinnamon and clove, these are Fall in pancake form!

Ingredients

Eggs – Add structure to these cupcakes. I have not tested any vegan egg substitutes but please share below if you do!

Coconut Sugar – One of my favorite refined-sugar free sweeteners to use. Adds a caramel-esc flavor to baked goods.

Pumpkin Puree – Very important to use 100% pumpkin puree and *not* pumpkin pie filling. Big difference in texture and flavor!

Coconut Oil – Make sure to use refined coconut oil as it has a neutral flavor, aka it won’t make these pumpkin cupcakes taste like coconut!

Gluten Free Flour – This recipe requires a 1:1 Gluten Free Flour Mix for optimal texture. I love using Bob’s Red Mill for all my gluten free flour baking recipes!

Almond Flour – Another gluten free flour that pairs perfectly with the gluten free 1:1 mix for structure while baking and overall texture. Make sure to use almond flour and not almond meal, the flour is much more fine ground!

Pumpkin Pie Spice – These pumpkin cupcakes wouldn’t be the same without the cozy addition of pumpkin pie spice. It’s most often a blend of cinnamon, cloves, ginger, nutmeg, and sometimes allspice.

Baking Soda – Gives rise and structure to the cupcakes while baking.

Pumpkin spice cupcakes with maple cream cheese frosting sit on a white tray. There's cinnamon sprinkled on top of the cupcakes and cinnamon sticks sitting to the side.

Maple Cream Cheese Frosting

Thick and luscious, this maple cream cheese frosting is dangerously delicious. I could eat it by the spoonful and will admit that I did quite a bit of “taste testing” while making it … couldn’t resist 😉

I’ve always been a fan of the pumpkin spice + cream cheese combination so this frosting was an absolute must for the cupcakes. It adds such a cool and creamy contrast to the warming spice of the pumpkin cupcakes, it’s a match made in heaven! All you’ll need …

Cream Cheese – I love using a high quality cream cheese for the rich flavor and creamy texture. If you need to make this dairy free, I suggest using Kite Hill dairy free cream cheese. The flavor and texture was spot on!

Powdered Sugar – Sweetens the cream cheese mixture and adds the light and fluffy texture necessary for frosting.

Maple Syrup – Adds sweetens plus Fall flavor with the cozy essence of maple.

Cinnamon – It wouldn’t be a Fall recipe without even more cinnamon now would it?!

How to Make Pumpkin Spice Cupcakes with Cream Cheese Frosting

  1. Preheat the oven to 350F and line 12 muffins with regular size muffin liners from If You Care.
  2. In a medium mixing bowl, whisk together eggs and coconut sugar. Add pumpkin puree and stir until combined. Whisk in melted coconut oil and vanilla extract until well combined.
  3. In a small bowl, whisk together the gluten free flour, almond flour, pumpkin pie spice, ground cinnamon, baking soda and salt.
  4. To the mixing bowl with the wet ingredients, fold in dry ingredients just until moistened.
  5. Split batter evenly between 12 lined muffin tins, filling until they are full. I used a tbsp sized cookie scoop.
  6. Move to the oven and bake at 350F for 25-30 minutes (mine took 28 minutes), or until a toothpick inserted in the middle comes out crumb free. Let cool completely.
  7. While the cupcakes are cooling, make your frosting. To a large mixing bowl, add your cream cheese, powdered sugar, maple syrup, and ground cinnamon until smooth. 
  8. Top your cooled cupcakes with the maple cinnamon cream cheese frosting. Enjoy!
Pumpkin cupcakes with maple cream cheese frosting sit on a white tray. There's cinnamon sprinkled on top of the cupcakes and cinnamon sticks sitting to the side.

How to Frost Cupcakes

Now I will admit, when I’m not planning to photograph my sweets I’m not one to get so *fancy* with the frosting. I’ll typically just use a spoon or spatula to spread a thick layer on top of the cupcake and call it good!

If you want to do something a little extra though, here are my tips.

  • Chill the frosting in the fridge for 30 minutes to an hour. You want it to firm up a bit without getting too hard.
  • Cool the cupcakes completely! This step is important because if the cupcake is still warm in the slightest, the frosting will begin to melt/soften and lose its shape.
  • Use a piping bag or a ziploc bag. Once your frosting is chilled, spoon it into a piping bag or ziploc and cut a tiny corner piece off. Gently squeeze the bag until frosting starts to pipe out of the opening.
  • Keep it simple! As you can see with these cupcakes, I just did a simple layered circle design to add height and volume to the cupcakes.

Healthy Pumpkin Desserts

If you’re like me and can’t get enough of the pumpkin baked goods, these are the recipes you should try next!

Pumpkin Spice Sugar Cookies – A soft fluffy inside and crisp cinnamon sugar outside make these pumpkin cookies one of my favorites. Think of them as the traditional sugar cookie but with a fun pumpkin twist.

Pumpkin Pie Bars – A crisp shortbread like crust is topped with creamy pumpkin pie mixture and whipped cream. Just like pumpkin pie but 10x easier and just as delicious!

If you try any of these recipes, please let me know by leaving a comment and rating in the boxes below! I always love to hear from you, and it also helps other people find this recipe when they search online for the BEST Pumpkin Cupcakes with Maple Cream Cheese Frosting 🙂

Pumpkin cupcakes with maple cream cheese frosting, cinnamon, and star anise to garnish sit on a white tray. The front cupcake has a bite taken out of it.

Pumpkin Cupcakes with Maple Cream Cheese Frosting

Author Casey Colodny
Prep: 5 minutes minutes
Cook: 25 minutes minutes
Total: 30 minutes minutes
Servings: 12 cupcakes
Print Leave a Review
Fluffy gluten free pumpkin cupcakes infused with warming notes of pumpkin spice. Maple cream cheese frosting heightens the sweet Fall flavor of these cupcakes!

Ingredients

Wet

  • 2 ea large eggs
  • ⅔ cup coconut sugar
  • 1 15oz can pumpkin puree
  • ½ cup coconut oil melted and cooled
  • 2 tsp vanilla extract

Dry

  • 1 cup GF flour must be a 1:1 flour replacement*
  • 1 cup super fine blanched almond flour
  • 2 tsp pumpkin pie spice
  • 1 tsp ground cinnamon
  • 2 tsp baking soda
  • ¼ tsp salt

Maple Cream Cheese Frosting

  • 12 oz cream cheese** 1.5 blocks
  • ¾ cup powdered sugar
  • 1½ tbsp pure maple syrup
  • 1 tsp ground cinnamon

Instructions

  • Preheat the oven to 350F and line 12 muffins with regular size muffin liners.
  • In a medium mixing bowl, whisk together eggs and coconut sugar. Add pumpkin puree and stir until combined. Whisk in melted coconut oil and vanilla extract until well combined.
    A white bowl filled with whisked pumpkin puree, coconut sugar, coconut oil, and vanilla extract.
  • In a small bowl, whisk together the gluten free flour, almond flour, pumpkin pie spice, ground cinnamon, baking soda and salt.
    A white bowl filled with gluten free flour, almond flour, cinnamon, baking soda, and pumpkin pie spice.
  • To the mixing bowl with the wet ingredients, fold in dry ingredients just until moistened.
    A white bowl filled with mixed pumpkin cupcake batter.
  • Split batter evenly between 12 lined muffin tins, filling until they are full. I used a 4 tbsp cookie scoop.
    A muffin tin filled with twelve servings of pumpkin cupcake batter ready to be baked.
  • Move to the oven and bake at 350F for 25-30 minutes (mine took 28 minutes), or until a toothpick inserted in the middle comes out crumb free. Let cool completely.
  • While the cupcakes are cooling, make your frosting. To a large mixing bowl, add your cream cheese, powdered sugar, maple syrup, ground cinnamon, and blend together with a hand mixer until smooth.
  • Top your cooled cupcakes with the maple cinnamon cream cheese frosting. Enjoy!
    A pumpkin cupcake with maple cream cheese frosting and cinnamon sits on a cupcake wrapper with a fork beside it to enjoy.

Notes

*I used Bob’s Red Mill 1:1 GF Flour replacement
** To make the frosting dairy free, substitute Kite Hill vegan cream cheese.

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About Casey Colodny

Avid home cook and baker since College, Casey went on to attend Le Cordon Bleu in Paris and complete the basic intensive cuisine course. Interested in creating healthier recipes for the V/GF, vegetarian, pescatarian, and paleo eaters! Started The Mindful Hapa in 2018 and has been cooking and sharing tasty recipes and photography ever since.

Reader Interactions

8 comments

  1. Sam Cooke says

    November 19, 2022 at 8:21 pm

    5 stars
    I love this recipe! I made it 3 times last month and it got better every time 🙂 I add a fistful of ancient grains/oats (TJ brand) and it works so well. Thank you!

    Reply
    • Casey Colodny says

      November 20, 2022 at 11:39 pm

      Thank you for leaving such a sweet message and so happy to hear you love these!! – Casey

      Reply
  2. Marcela says

    October 27, 2021 at 10:50 am

    5 stars
    Egg substitute I use is flax seeds
    Tbs of flax substitutes for 1 egg and 3 tablespoons of water let it soak for 5 minutes

    Reply
    • Casey Colodny says

      October 27, 2021 at 11:02 am

      Hey Marcela! So glad that worked out in this recipe! Thanks for letting folks know if they want to try this recipe without eggs 🙂 – Casey

      Reply
  3. Nicole says

    October 18, 2021 at 1:45 pm

    5 stars
    This original recipe is AMAZING and one of my favorites! Always a hit when I bring them to family or coworkers.

    I made some tweaks to help decrease the fat intake and came out really delicious!

    Substitute: applesauce/avocado oil in place of coconut oil

    Cassava/cauliflower flour from TJs in place of almond flour.

    I tried using fat free Greek yogurt for the frosting which was a big fail lol.

    Reply
    • Casey Colodny says

      October 19, 2021 at 7:56 am

      So happy to hear you loved this recipe and those are really helpful substitutions to know that worked as well!! Thanks, Nicole! – Casey

      Reply

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